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Computational Biology and Informatics Lab (CBIL)

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EpoDB

EpoDB (Erythropoiesis database) was a database of genes that relate to vertebrate red blood cells. It included DNA sequence, structural features, protein information, gene expression information and transcription factor binding sites.

Papers on EpoDB

  1. Salas, F., Haas, J., Stoeckert, C.J.Jr., and Overton, G.C. EpoDB: an erythropoiesis gene expression database in progress. Proceedings of the German Conference on Bioinformatics, Leipzig, Germany, Sept. 30-Oct.2, 1996.
  2. Salas, F., Haas, J., Brunk, B., Stoeckert, C.J. Jr., Overton, G.C. (1998) EpoDB: a database of genes expressed during vertebrate erythropoiesis. Nucl. Acids Res. 26:288-289.
  3. Stoeckert,C., Podkolodnaya,O.A., Kel,A.E., Brunk,B., Haas,J., Salas,F., Stepanenko,I.L., Ignatieva,E.V., Kel-Margoulis,O.V., Ananko,E.A., Podkolodny,N.L., Overton G.C., Kolchanov N.A. (1998) EpoGERD. Proceedings of the First International Conference on Bioinformatics of Genome Regulation and Structure (BGRS’98), 1, 20-24.
  4. Stoeckert, C.J. Jr., Salas, F., Brunk, B., Overton, G.C. (1999) EpoDB: a prototype database for the analysis of genes expressed during vertebrate erythropoiesis. Nucl. Acids Res. 27:200-203. Reproduced with permission from NAR Online.